Thanksgiving Pumpkin Cheesecake Muffins

Featured in: Seasonal Pastries

Experience the warmth of autumn spices and velvety cheesecake in fluffy pumpkin muffins that blend rich flavors with holiday comfort. This dessert features a silky cream cheese center gently swirled within moist pumpkin batter, topped optionally with crunchy nuts. Easy to prepare, these treats combine classic American sweetness and creamy texture, making them a standout for Thanksgiving parties or cozy family afternoons. Suitable for vegetarians and adaptable for nut-free diets, each muffin delivers moist crumb and spiced aroma, ensuring festive delight in every bite.

Updated on Wed, 29 Oct 2025 15:19:00 GMT
Moist Thanksgiving Pumpkin Cheesecake Muffins topped with a creamy swirl and nuts.  Save
Moist Thanksgiving Pumpkin Cheesecake Muffins topped with a creamy swirl and nuts. | butterhearth.com

Moist pumpkin muffins with a creamy cheesecake swirl—perfectly spiced and ideal for festive gatherings.

I first made these Thanksgiving Pumpkin Cheesecake Muffins for our family holiday brunch. The fragrant aroma of pumpkin spice filled the kitchen, and everyone loved the surprising swirl of creamy cheesecake in each muffin. It's become one of our favorite seasonal treats for festive mornings.

Ingredients

  • All-purpose flour: 1 3/4 cups (220 g)
  • Granulated sugar: 1 cup (200 g), plus 1/4 cup (50 g) for cheesecake filling
  • Brown sugar, packed: 1/2 cup (100 g)
  • Baking soda: 1 tsp
  • Baking powder: 1/2 tsp
  • Salt: 1/2 tsp
  • Pumpkin pie spice: 2 tsp
  • Large eggs: 2, plus 1 egg yolk for cheesecake filling
  • Canned pumpkin purée: 1 cup (240 g)
  • Vegetable oil: 1/2 cup (120 ml)
  • Milk: 1/4 cup (60 ml)
  • Vanilla extract: 1 tsp, plus 1/2 tsp for cheesecake filling
  • Cream cheese, softened: 8 oz (225 g)
  • Optional Topping: 1/4 cup (30 g) chopped pecans or walnuts

Instructions

Prep and Preheat:
Preheat the oven to 350°F (175°C). Line a 12-cup muffin tin with paper liners or grease lightly.
Mix Dry Ingredients:
In a large bowl, whisk together flour, granulated sugar, brown sugar, baking soda, baking powder, salt, and pumpkin pie spice.
Mix Wet Ingredients:
In a separate bowl, whisk together eggs, pumpkin purée, vegetable oil, milk, and vanilla extract until smooth.
Combine and Blend:
Add the wet ingredients to the dry ingredients, stirring just until combined. Do not overmix.
Make Cheesecake Filling:
In another bowl, beat cream cheese until smooth. Add sugar, egg yolk, and vanilla extract, beating until creamy and well combined.
Fill Muffin Cups:
Fill each muffin cup about 2/3 full with pumpkin batter.
Swirl Cheesecake:
Spoon about 1 tablespoon of cheesecake filling onto the center of each muffin; gently swirl with a toothpick or knife.
Add Topping:
Sprinkle muffins with chopped nuts if desired.
Bake:
Bake for 22–25 minutes, or until a toothpick inserted into the muffin (not the cheesecake center) comes out clean.
Cool:
Cool muffins in the pan for 5 minutes, then transfer to a wire rack to cool completely.
Deliciously spiced pumpkin muffins with a rich cheesecake filling for holiday feasts.  Save
Deliciously spiced pumpkin muffins with a rich cheesecake filling for holiday feasts. | butterhearth.com

We always set aside a few of these muffins to enjoy with warm drinks during family game night. The little ones love swirling the cheesecake into the pumpkin batter!

Required Tools

12-cup muffin tin, mixing bowls, electric mixer or whisk, measuring cups and spoons, toothpick or knife, wire rack

Allergen Information

Contains wheat (gluten), eggs, dairy, and tree nuts if using nuts. Always double-check ingredient labels for allergies.

Nutritional Information (per muffin)

Calories: 285, Total Fat: 14 g, Carbohydrates: 36 g, Protein: 4 g

Fluffy pumpkin muffins featuring a velvety cheesecake layer, perfect for festive gatherings. Save
Fluffy pumpkin muffins featuring a velvety cheesecake layer, perfect for festive gatherings. | butterhearth.com

Serve Thanksgiving Pumpkin Cheesecake Muffins slightly chilled for best texture. They keep well refrigerated for up to 3 days.

Recipe Questions

Can I substitute pumpkin purée with fresh pumpkin?

Yes, roast and mash fresh pumpkin until smooth and use the same quantity as canned purée. Drain excess moisture for best texture.

How can I make these nut-free?

Simply omit the nut topping or use pumpkin seeds for crunch. The muffins are delicious even without added nuts.

Is chilling required before serving?

Enjoy these muffins slightly chilled or at room temperature. Refrigeration also helps preserve the creamy swirl.

Can I use a hand whisk instead of an electric mixer?

Absolutely! Just ensure the cream cheese filling is very smooth before adding to the muffins.

How do I know when the muffins are baked?

Insert a toothpick into the muffin part (not cheesecake center); it should come out clean when done.

Can I freeze these muffins?

Yes, wrap muffins tightly and freeze up to a month. Thaw at room temperature before serving.

Thanksgiving Pumpkin Cheesecake Muffins

Creamy cheesecake swirled into spiced pumpkin muffins, ideal for fall gatherings and holiday baking.

Prep duration
20 min
Time to cook
25 min
Complete duration
45 min
Created by Grace Mitchell


Skill Level Easy

Heritage American

Output 12 Portions

Dietary considerations Meat-Free

Components

Pumpkin Muffin Batter

01 1 3/4 cups all-purpose flour
02 1 cup granulated sugar
03 1/2 cup packed brown sugar
04 1 teaspoon baking soda
05 1/2 teaspoon baking powder
06 1/2 teaspoon salt
07 2 teaspoons pumpkin pie spice
08 2 large eggs
09 1 cup canned pumpkin purée
10 1/2 cup vegetable oil
11 1/4 cup milk
12 1 teaspoon vanilla extract

Cheesecake Filling

01 8 ounces cream cheese, softened
02 1/4 cup granulated sugar
03 1 large egg yolk
04 1/2 teaspoon vanilla extract

Optional Topping

01 1/4 cup chopped pecans or walnuts

Directions

Stage 01

Preheat Oven and Prepare Tin: Set oven to 350°F. Line a 12-cup muffin tin with paper liners or lightly grease each cup.

Stage 02

Mix Dry Ingredients: In a large bowl, whisk together flour, granulated sugar, brown sugar, baking soda, baking powder, salt, and pumpkin pie spice until evenly combined.

Stage 03

Combine Wet Ingredients: In a separate bowl, whisk eggs, pumpkin purée, vegetable oil, milk, and vanilla extract until smooth and homogeneous.

Stage 04

Combine Batter: Pour the wet mixture into the dry ingredients. Stir just until integrated, taking care not to overmix the batter.

Stage 05

Prepare Cheesecake Mixture: Beat softened cream cheese in another bowl until smooth. Add granulated sugar, egg yolk, and vanilla extract; continue beating until creamy.

Stage 06

Fill Muffin Cups: Spoon pumpkin batter into each muffin cup, filling about two-thirds full.

Stage 07

Add Cheesecake Swirl: Place approximately 1 tablespoon cheesecake mixture on the center of each muffin. Swirl gently with a toothpick or knife for a marbled effect.

Stage 08

Add Optional Topping: Sprinkle chopped pecans or walnuts on top, if desired.

Stage 09

Bake: Bake for 22 to 25 minutes, or until a toothpick inserted into the pumpkin portion of the muffin comes out clean.

Stage 10

Cool and Serve: Let muffins cool in the pan for 5 minutes, then transfer to a wire rack to cool fully before serving.

Necessary tools

  • 12-cup muffin tin
  • Mixing bowls
  • Electric mixer or manual whisk
  • Measuring cups and measuring spoons
  • Toothpick or knife
  • Wire rack

Allergy details

Review each component for potential allergens and consider consulting with a healthcare provider if you're unsure about certain ingredients.
  • Contains wheat (gluten), eggs, dairy, and tree nuts (if topping is used). Always verify product labels for allergens.

Nutritional information (per portion)

These values are estimates only and shouldn't replace professional medical guidance.
  • Energy Value: 285
  • Fats: 14 g
  • Carbohydrates: 36 g
  • Protein Content: 4 g